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G4X-helpers

Helper models and post-processing tools for G4X data.

$ git clone https://github.com/singular-genomics/g4x-helpers

With G4X-helpers we provide an open-source toolkit for common downstream tasks — such as applying custom segmentations or adding your own labels to the G4X-viewer. You can access its core features from the command-line interface (CLI) and additionally import it as a standalone Python package to interact with your data.

In this section you can learn:

  • how to install G4X-helpers on your system
  • get started with using the command line interface (CLI)
  • find a description of CLI features